Synthesis and properties of 6-alkynyl-5-aryluracils

• Ruben Manuel Figueira de Abreu,
• Till Brockmann,
• Alexander Villinger,
• Peter Ehlers and
• Peter Langer

Beilstein J. Org. Chem. 2024, 20, 898–911, doi:10.3762/bjoc.20.80

• synthesized by other methods and the single Suzuki reaction on uracil is well studied [42][69][70][71]. Physical properties The photophysical properties of selected derivatives were investigated by steady-state absorption and photoluminescence spectroscopy. The influence of the substitution pattern on the

• compounds show a very similar absorption band, indicating that the first transition state (S0 → S1) does not seem to be affected by the substitution pattern. Furthermore, all compounds show broadened absorption bands and no major differences in the first absorption band were observed. The greatest

• could be observed with an absorption band at 273 nm and a shoulder at 306 nm. The second highest peak was observed for 5f, followed by 5m. Only one broadened peak was observed in both cases. The influence of the substitution pattern could be revealed by comparing the two regioisomers 5d and 5k. As a

(Bio)isosteres of ortho- and meta-substituted benzenes

• H. Erik Diepers and
• Johannes C. L. Walker

Beilstein J. Org. Chem. 2024, 20, 859–890, doi:10.3762/bjoc.20.78

• ortho-benzenes have, with different substitution patterns, also been suggested as potential bioisosteric replacements of meta-benzenes. In some cases, similar synthetic approaches may be adopted, but in many a new route is required to access the new substitution pattern. 1,3-Disubstituted bicyclo[2.1.1

Switchable molecular tweezers: design and applications

• Pablo Msellem,
• Maksym Dekthiarenko,
• Nihal Hadj Seyd and
• Guillaume Vives

Beilstein J. Org. Chem. 2024, 20, 504–539, doi:10.3762/bjoc.20.45

• be achieved by changing the substitution pattern of the terpyridine from 6,6” to 4,4” (Figure 12). Due to the repulsion between the nitrogen lone pairs, the 4,4”-substituted terpy adopts a “U” conformation in the non-complexed state and can be switched by metal coordinating to a “W” open conformation

Ligand effects, solvent cooperation, and large kinetic solvent deuterium isotope effects in gold(I)-catalyzed intramolecular alkene hydroamination

• Ruichen Lan,
• Brock Yager,
• Yoonsun Jee,
• Cynthia S. Day and
• Amanda C. Jones

Beilstein J. Org. Chem. 2024, 20, 479–496, doi:10.3762/bjoc.20.43

• , acetonitrile, and the triflate counterion [66]. Theoretical calculation of binding constants predict that esters coordinate more strongly than alkynes, and water [68]. Alkenes have been shown in some cases to coordinate more strongly than alkynes, but the trend depends on substitution pattern (alkynes can

Photochromic derivatives of indigo: historical overview of development, challenges and applications

• Gökhan Kaplan,
• Zeynel Seferoğlu and
• Daria V. Berdnikova

Beilstein J. Org. Chem. 2024, 20, 228–242, doi:10.3762/bjoc.20.23

• the photoreaction, is advantageous for applications in bulk materials because the photoisomers have decreased absorbance at the excitation wavelength [9]. Depending on the substitution pattern, the quantum yields for the E–Z photoisomerization of indigo photochromes vary from 0.001 to 0.46 and the

Photoinduced in situ generation of DNA-targeting ligands: DNA-binding and DNA-photodamaging properties of benzo[c]quinolizinium ions

• Julika Schlosser,
• Olga Fedorova,
• Yuri Fedorov and
• Heiko Ihmels

Beilstein J. Org. Chem. 2024, 20, 101–117, doi:10.3762/bjoc.20.11

• , both as photo-controllable DNA binder and as DNA-damaging photosensitizer. Still, some key parameters have to be optimized by variation of the substitution pattern. For example, the water solubility of the styrylpyridine substrates has to be increased, and the excitation wavelength for the

Synthesis of 7-azabicyclo[4.3.1]decane ring systems from tricarbonyl(tropone)iron via intramolecular Heck reactions

• Aaron H. Shoemaker,
• Elizabeth A. Foker,
• Elena P. Uttaro,
• Sarah K. Beitel and
• Daniel R. Griffith

Beilstein J. Org. Chem. 2023, 19, 1615–1619, doi:10.3762/bjoc.19.118

• the same substitution pattern as substrate 7 tend to give poor yields in similar intramolecular Heck reactions [20]. Moreover, it was found that substrates on which the halide is cis to an additional methyl substituent (used to forge the ethylidene-substituted polycycle common to many alkaloids) often

Consecutive four-component synthesis of trisubstituted 3-iodoindoles by an alkynylation–cyclization–iodination–alkylation sequence

• Nadia Ledermann,
• Alae-Eddine Moubsit and
• Thomas J. J. Müller

Beilstein J. Org. Chem. 2023, 19, 1379–1385, doi:10.3762/bjoc.19.99

• that are accessible in two steps from indole carboxylates [36]. Our two-step approach taking advantage of a de novo formation of 3-iodoindoles with variable substitution pattern in a consecutive four-component process provides a concise access to the aforementioned class of emitters. For example the

Palladium-catalyzed enantioselective three-component synthesis of α-arylglycine derivatives from glyoxylic acid, sulfonamides and aryltrifluoroborates

• Bastian Jakob,
• Nico Schneider,
• Luca Gengenbach and
• Georg Manolikakes

Beilstein J. Org. Chem. 2023, 19, 719–726, doi:10.3762/bjoc.19.52

• . However, depending on the nature/substitution pattern of the arylboronic acid, some of the arylglycine products could only be obtained in very low enantioselectivities. This can be attributed to a fast, uncatalyzed racemic background reaction of the boronic acids, in particular for electron-rich or

Strategies in the synthesis of dibenzo[b,f]heteropines

• David I. H. Maier,
• Barend C. B. Bezuidenhoudt and
• Charlene Marais

Beilstein J. Org. Chem. 2023, 19, 700–718, doi:10.3762/bjoc.19.51

• substitution pattern, it requires a para-substituted ester as a directing group. The strategy furthermore cannot access 5H-dibenzo[b,f]azepines 1a as the ethylene bridge would cross react with the brominating agent [55][56]. N-Aryl and N-alkyldihydropyridobenzazepines 75 and 76 were synthesised by Tsoung et al

Access to cyclopropanes with geminal trifluoromethyl and difluoromethylphosphonate groups

• Ita Hajdin,
• Romana Pajkert,
• Mira Keßler,
• Jianlin Han,
• Haibo Mei and
• Gerd-Volker Röschenthaler

Beilstein J. Org. Chem. 2023, 19, 541–549, doi:10.3762/bjoc.19.39

• closely linked to the substitution pattern of the cyclopropane unit [2]. The prevalence of the biologically active cyclopropyl derivatives, either isolated from natural sources or rationally designed as pharmaceutical agents, has inspired chemists to find efficient methods for their preparation. Among

Transition-metal-catalyzed domino reactions of strained bicyclic alkenes

• Austin Pounder,
• Eric Neufeld,
• Peter Myler and
• William Tam

Beilstein J. Org. Chem. 2023, 19, 487–540, doi:10.3762/bjoc.19.38

• be shifted to the 1,4-addition producing a cyclopentene product leading to the conclusion that the substitution pattern on the boronate ester played a significant role in the selectivity between 1,6-addition and 1,4-addition. The mechanism proposed by the authors initially begins in the same manner

Transition-metal-catalyzed C–H bond activation as a sustainable strategy for the synthesis of fluorinated molecules: an overview

• Louis Monsigny,
• Floriane Doche and
• Tatiana Besset

Beilstein J. Org. Chem. 2023, 19, 448–473, doi:10.3762/bjoc.19.35

• . The substitution pattern on the aromatic ring did not affect the reaction efficiency, the meta-substituted derivative 2e as well as the ortho-substituted derivative 2f were obtained in high yields (70% and 63% yields, respectively). It should be noted that the presence of ortho-substituents on the

• , from 52 to 91% yields). The substitution pattern of the aromatic ring had no impact on the outcome of the reaction as illustrated with substrates substituted by a methyl group (7b, 7d, and 7f) at the para-, meta- and ortho-positions, which were readily functionalized in 71%, 84% and 78% yields

• (CH3CN)3](SbF6)2 and N-trifluoromethylthiodibenzenesulfonimide VII as electrophilic SCF3 source (Scheme 12) [125]. Under these reaction conditions, 2-arylpyridines (9 examples, up to 94% yield) or 6-arylpurines (10 examples, up to 72% yield) were ortho-trifluoromethylthiolated. The substitution pattern

Synthesis, α-mannosidase inhibition studies and molecular modeling of 1,4-imino-ᴅ-lyxitols and their C-5-altered N-arylalkyl derivatives

• Martin Kalník,
• Sergej Šesták,
• Juraj Kóňa,
• Maroš Bella and
• Monika Poláková

Beilstein J. Org. Chem. 2023, 19, 282–293, doi:10.3762/bjoc.19.24

• enzyme. Therefore, the next efforts should be focused on the identification of a novel N-substitution pattern of the DIM skeleton that would have more beneficial effects on the inhibition profile. Natural iminosugars (1,4-dideoxy-1,4-imino-ᴅ-mannitol (DIM) and swainsonine) and selected examples of

Sequential hydrozirconation/Pd-catalyzed cross coupling of acyl chlorides towards conjugated (2E,4E)-dienones

• Benedikt Kolb,
• Daniela Silva dos Santos,
• Sanja Krause,
• Anna Zens and
• Sabine Laschat

Beilstein J. Org. Chem. 2023, 19, 176–185, doi:10.3762/bjoc.19.17

• substituents in the one-pot reaction and showed that regardless of the substitution pattern, the reactions lead to the stereoselective formation (≥95% (2E,4E)) of the respective dienones under mild conditions. It was found that enynes with alkyl chains gave higher yields than the corresponding aryl-substituted

Synthetic strategies for the preparation of γ-phostams: 1,2-azaphospholidine 2-oxides and 1,2-azaphospholine 2-oxides

• Jiaxi Xu

Beilstein J. Org. Chem. 2022, 18, 889–915, doi:10.3762/bjoc.18.90

• with the generated styrene in the reaction mixture (Scheme 18) [42]. One year later, the same group investigated the influence of the double bond geometry and the substitution pattern on the alkene. The results indicated that the double bond geometry plays a moderate role, while the bulkiness of the R

BINOL as a chiral element in mechanically interlocked molecules

• Matthias Krajnc and
• Jochen Niemeyer

Beilstein J. Org. Chem. 2022, 18, 508–523, doi:10.3762/bjoc.18.53

• ) and in the substitution pattern of the macrocycle (R = H or iPr in the 3,5-positions of the phenylene linkers, for 56 or 57; see Figure 14). These heterobifunctional chiral catalysts were studied for the asymmetric Michael addition of malonic acid diethyl ester (59) to cinnamaldehydes 58. While the

Synthesis of highly substituted fluorenones via metal-free TBHP-promoted oxidative cyclization of 2-(aminomethyl)biphenyls. Application to the total synthesis of nobilone

• Ilya A. P. Jourjine,
• Lukas Zeisel,
• Jürgen Krauß and
• Franz Bracher

Beilstein J. Org. Chem. 2021, 17, 2668–2679, doi:10.3762/bjoc.17.181

• , lead us to believe that the substitution pattern is what determines the efficiency of the reaction rather than which of both rings the substituents are connected to. Surprisingly, fluorenone 10c was isolated in an excellent yield (92%). Based on these datapoints, no clear conclusion can be drawn as to

• ). Electronic effects propagated by substituents were observed to have an influence on the reaction. In general, electron-withdrawing groups on the radical accepting arene had adverse effects, while electron donating groups, depending on the substitution pattern, had either a positive or negative effect of

Chemical syntheses and salient features of azulene-containing homo- and copolymers

• Vijayendra S. Shetti

Beilstein J. Org. Chem. 2021, 17, 2164–2185, doi:10.3762/bjoc.17.139

• the substitution pattern of the azulene units on this behavior. The polymer containing entirely 1,3-substituted azulene, 117, exhibited a strong fluorescence at 420 nm in the protonated state and the attenuation of the fluorescence signals took place with the increasing population of 4,7-disubstitued

Progress and challenges in the synthesis of sequence controlled polysaccharides

• Giulio Fittolani,
• Theodore Tyrikos-Ergas,
• Denisa Vargová,
• Manishkumar A. Chaube and
• Martina Delbianco

Beilstein J. Org. Chem. 2021, 17, 1981–2025, doi:10.3762/bjoc.17.129

• for the introduction of unnatural modifications. However, the control over the length and substitution pattern remains poor. To ensure good regio- and stereoselectivity, the starting material, often a polycyclic compound, has to be designed with suitable protecting groups (PGs). These structures can

• compounds with well-defined length and substitution pattern (Figure 1C), but requires a substantial synthetic effort. For this reason, only few examples of long polysaccharides prepared by chemical synthesis are available. Properly designed building blocks (BBs) are needed, often prepared following numerous

• towards the synthesis of well-defined polysaccharides, with particular focus on how to control the length and the substitution pattern. Each section describes a class of polysaccharides based on a particular monosaccharide backbone (Figure 2). For each class, we discuss the specific challenges associated

On the application of 3d metals for C–H activation toward bioactive compounds: The key step for the synthesis of silver bullets

• Renato L. Carvalho,
• Amanda S. de Miranda,
• Mateus P. Nunes,
• Roberto S. Gomes,
• Guilherme A. M. Jardim and
• Eufrânio N. da Silva Júnior

Beilstein J. Org. Chem. 2021, 17, 1849–1938, doi:10.3762/bjoc.17.126

• observed at the Dha-3 part and, according to the substitution pattern from the coupling partner, a higher preference for the substitution at the Dha-1 (product A) over the Dha-2 (product B) site was also observed (Scheme 38B), characterizing an excellent and valuable regio- and diastereoselectivity. In the

Breaking paracyclophane: the unexpected formation of non-symmetric disubstituted nitro[2.2]metaparacyclophanes

• Suraj Patel,
• Tyson N. Dais,
• Paul G. Plieger and
• Gareth J. Rowlands

Beilstein J. Org. Chem. 2021, 17, 1518–1526, doi:10.3762/bjoc.17.109

• chemistry can produce any substitution pattern there are few unsymmetrical [2.2]metaparacyclophanes (3) and only one X-ray crystallographic structure found in the CCDC database, and this is a triple-layered cyclophane [44]. We have been interested in the formation of substituted [2.2]paracyclophanes for a

Cascade intramolecular Prins/Friedel–Crafts cyclization for the synthesis of 4-aryltetralin-2-ols and 5-aryltetrahydro-5H-benzo[7]annulen-7-ols

• Jie Zheng,
• Shuyu Meng and
• Quanrui Wang

Beilstein J. Org. Chem. 2021, 17, 1481–1489, doi:10.3762/bjoc.17.104

•  2). As expected, we observed that the initially formed cis-isomer of 14af turned gradually to trans-14af and finally reached 1:99 after 2 hours (for further details, see Supporting Information File 1). To further expand the substitution pattern, we then tried the reaction of 13a with allysilane as a

Structural effects of meso-halogenation on porphyrins

• Keith J. Flanagan,
• Maximilian Paradiz Dominguez,
• Zoi Melissari,
• Hans-Georg Eckhardt,
• René M. Williams,
• Dáire Gibbons,
• Caroline Prior,
• Gemma M. Locke,
• Alina Meindl,
• Aoife A. Ryan and
• Mathias O. Senge

Beilstein J. Org. Chem. 2021, 17, 1149–1170, doi:10.3762/bjoc.17.88

• complexes rather than direct interactions and alkyl moieties form a plethora of halogen···hydrogen interactions. Additionally, the substitution pattern greatly affects the overall conformation. By comparing the DFT calculated geometries with crystal structures we have found that DFT is a good approximation

Synthetic accesses to biguanide compounds

• Oleksandr Grytsai,
• Cyril Ronco and
• Rachid Benhida

Beilstein J. Org. Chem. 2021, 17, 1001–1040, doi:10.3762/bjoc.17.82